PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010087144.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 511aa    MW: 58224 Da    PI: 6.2778
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010087144.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix84.91e-26118215185
        trihelix   1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyf 82 
                     +Wt+++v++Li+a+++++e+ ++++            +kk++W++vsk+m+erg+++sp+qC++k+++lnkryk+++++ +++ +++++++ +++
  XP_010087144.1 118 KWTDKMVKLLITAVSYIGEDAGSDCgagggrrkfailQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKRLNDMLGRGtSCQVVENPALL 212
                     7*********************99888999999***9**********************************************569999888887 PP

        trihelix  83 dql 85 
                     d +
  XP_010087144.1 213 DVI 215
                     765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.6E-23116242No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MEGHLSQGGM IPGGTSSSSY GIGGLDLQGS MRSHHHQHHH QGQHPHSIHP HQCPSSSVHE  60
IGSLHNCDHA ISLADYNKGA ERSKNSATAS EEDEPSFTEE GVDGHNEVNR GKPWQRVKWT  120
DKMVKLLITA VSYIGEDAGS DCGAGGGRRK FAILQKKGKW KSVSKVMAER GYHVSPQQCE  180
DKFNDLNKRY KRLNDMLGRG TSCQVVENPA LLDVIDYLTE KEKDDVRKIL SSKHLFYEEM  240
CSYHNGNRLH LPHDLALQRS LQLALRSRDD HDNEELRKVH QDDDLDEDDP DAETDDHDRD  300
DLEDNNINAS SHGDRGMYGI LVEPGKRFRQ SQGGEDVGFG SSLSVQDCNK SCYSQPQVQQ  360
LGQTDMNHAP PDGTRVAWLQ KQWIESRSLQ LEERKLQIQV EMLELERQRL KWQRFTKKRD  420
RELEKLRMEN VRMKLENERM ALELKREEIG LFVSLTEWQL MSIFISMFCL RCSRLYDYDY  480
VSGRPKTPLI AASESDITSS AEIAVCSFIL V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010087144.10.0hypothetical protein L484_007394
TrEMBLW9QM750.0W9QM75_9R
STRINGGLYMA10G36980.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50013157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.11e-144sequence-specific DNA binding transcription factors